简介:
Most compound collections (corporate databases, screening libraries, compound-provider catalogs) are comprised of 2D structures with incomplete and/or incorrect indications of stereochemistry. This inevitably leads to arbitrary and/or incorrect stereochemistry when these structures are converted to 3D. Although a compound may be registered with complete stereochemistry, often the "wrong" stereoisomer of an active compound is used in a virtual HTS application such as docking, 3D-searching, or 3D-QSAR. This may result in a missed hit of potentially immense importance. StereoPlex® addresses this issue.
StereoPlex generates multiple stereoisomers of each input structure according to a user-specified limit on the number of stereoisomers and a user-specified priority rule which tells the program which stereoisomers to generate if the complete set would exceed the user's limit. Subject to the user-specified priority rule, StereoPlex "multiplexes" both atom-centered (R/S) and bond-centered (E/Z) chirality. StereoPlex does not simply output all allowed permutations of chiral specifications, but rather employs a novel and unique algorithm to exclude topologically impossible stereoisomers.
说明下载:
StereoPlex Brochure
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Key Benefits
- Enables user-controlled "multiplexing" of stereocenters to avoid missing "hits" in docking, 3D-search, etc. due to using the incorrect stereoisomer for the given target
- Addresses both atom-centered (R/S) and bond-centered (E/Z) chirality
- User specifies maximum number of stereoisomers to output per compound
- User specifies priority rule for determining which stereocenters to address if maximum would be exceeded
- Automatically eliminates topologically impossible stereoisomers of ring-systems
- Supports input and output in SMILES and SD file format
- Easily incorporated into other programs, shell scripts, and "pipelined" protocols
